STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSAT_6X106600Glycosyltransferases; Involved in the synthesis of glucuronoxylan hemicellulose in secondary cell walls; Belongs to the glycosyltransferase 43 family. (390 aa)    
Predicted Functional Partners:
LSAT_4X84321
Exostosin domain-containing protein; Belongs to the glycosyltransferase 47 family.
      
 0.499
LSAT_5X80020
Uncharacterized protein.
     
 0.499
LSAT_7X114040
Uncharacterized protein.
      
 0.499
LSAT_9X83280
Hexosyltransferase; Belongs to the glycosyltransferase 8 family.
      
 0.483
LSAT_1X19340
Hexosyltransferase; Belongs to the glycosyltransferase 8 family.
      
 0.481
LSAT_4X176081
Hexosyltransferase; Belongs to the glycosyltransferase 8 family.
      
 0.481
LSAT_4X125900
Hexosyltransferase; Belongs to the glycosyltransferase 8 family.
      
 0.477
LSAT_6X112121
Hexosyltransferase; Belongs to the glycosyltransferase 8 family.
      
 0.477
LSAT_9X40241
Hexosyltransferase; Belongs to the glycosyltransferase 8 family.
      
 0.434
LSAT_9X113901
AA_TRNA_LIGASE_II domain-containing protein.
      
 0.424
Your Current Organism:
Lactuca sativa
NCBI taxonomy Id: 4236
Other names: L. sativa, Lactuca sativa L., cultivated lettuce, garden lettuce
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