STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSAT_3X96480ABC transmembrane type-1 domain-containing protein. (265 aa)    
Predicted Functional Partners:
LSAT_3X18441
Uncharacterized protein; Belongs to the tetraspanin (TM4SF) family.
      
 0.647
LSAT_6X100781
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
    
 0.575
LSAT_2X85201
Uncharacterized protein.
    
 0.503
LSAT_4X165081
Uncharacterized protein.
    
 0.503
LSAT_3X62041
Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.
      
 0.449
LSAT_3X63561
ABC transporter domain-containing protein.
  
     0.443
LSAT_3X136921
ABC transporter domain-containing protein.
  
     0.419
LSAT_4X29220
Uncharacterized protein.
  
     0.414
LSAT_5X159661
ABC transporter domain-containing protein.
  
     0.403
LSAT_3X90181
ABC transporter domain-containing protein.
  
     0.403
Your Current Organism:
Lactuca sativa
NCBI taxonomy Id: 4236
Other names: L. sativa, Lactuca sativa L., cultivated lettuce, garden lettuce
Server load: low (28%) [HD]