STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSAT_2X86760Uncharacterized protein. (273 aa)    
Predicted Functional Partners:
LSAT_2X106361
FAS1 domain-containing protein.
  
    0.538
LSAT_2X85341
GP-PDE domain-containing protein.
  
 
  0.532
LSAT_3X11681
Uncharacterized protein.
  
     0.531
LSAT_6X11800
Lipase_3 domain-containing protein.
  
     0.529
LSAT_5X104100
Uncharacterized protein.
  
     0.526
LSAT_1X97920
Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism.
  
  
  0.524
LSAT_5X6540
Uncharacterized protein.
  
     0.524
LSAT_3X11060
Lipase_3 domain-containing protein.
  
     0.522
LSAT_4X38100
F-box domain-containing protein.
  
 
  0.521
LSAT_6X12600
Lipase_3 domain-containing protein.
  
     0.520
Your Current Organism:
Lactuca sativa
NCBI taxonomy Id: 4236
Other names: L. sativa, Lactuca sativa L., cultivated lettuce, garden lettuce
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