STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSAT_9X18420Uncharacterized protein. (305 aa)    
Predicted Functional Partners:
LSAT_5X9321
FRIGIDA-like protein; Belongs to the Frigida family.
  
 
 0.544
LSAT_1X124320
C3H1-type domain-containing protein.
    
 0.455
LSAT_2X65881
Uncharacterized protein.
  
     0.449
LSAT_8X41181
U-box domain-containing protein.
  
     0.449
LSAT_8X28800
Uncharacterized protein.
  
     0.433
LSAT_6X46101
C3H1-type domain-containing protein.
  
    0.429
LSAT_3X103841
Uncharacterized protein.
  
 
   0.424
LSAT_7X27781
TCP domain-containing protein.
  
     0.421
LSAT_6X102161
FLZ-type domain-containing protein.
  
     0.420
LSAT_8X106840
BED-type domain-containing protein.
      
 0.418
Your Current Organism:
Lactuca sativa
NCBI taxonomy Id: 4236
Other names: L. sativa, Lactuca sativa L., cultivated lettuce, garden lettuce
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.