STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSAT_3X4220Uncharacterized protein. (618 aa)    
Predicted Functional Partners:
LSAT_4X75140
Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.
  
 0.953
LSAT_4X66781
Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.
  
 0.953
LSAT_3X30360
SufE domain-containing protein.
  
 0.917
LSAT_1X128700
Uncharacterized protein.
  
 0.786
LSAT_3X16601
Uncharacterized protein.
  
 0.786
LSAT_3X64121
ThiF domain-containing protein.
    
 0.626
LSAT_4X17621
Hcy-binding domain-containing protein.
     
 0.528
LSAT_9X6080
Hcy-binding domain-containing protein.
     
 0.528
LSAT_5X186100
Hcy-binding domain-containing protein.
     
 0.528
LSAT_1X112501
Aminotran_5 domain-containing protein.
    
 0.507
Your Current Organism:
Lactuca sativa
NCBI taxonomy Id: 4236
Other names: L. sativa, Lactuca sativa L., cultivated lettuce, garden lettuce
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