STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSAT_4X121001Uncharacterized protein. (220 aa)    
Predicted Functional Partners:
LSAT_5X43041
Uncharacterized protein.
  
  
 0.769
atp4
ATPase subunit 4.
  
  
 0.764
LSAT_4X66001
Uncharacterized protein.
  
 
 0.752
rpl5
Ribosomal protein L5.
  
 
 0.752
LSAT_5X71841
Uncharacterized protein.
  
 
 0.750
LSAT_7X25860
Uncharacterized protein.
  
 
 0.750
LSAT_0X35040
Uncharacterized protein.
   
  
 0.674
LSAT_7X67721
S4 RNA-binding domain-containing protein.
  
   0.672
LSAT_1X23980
Complex1_30kDa domain-containing protein; Belongs to the complex I 30 kDa subunit family.
   
  
 0.645
LSAT_6X108960
Intron_maturas2 domain-containing protein.
 
     0.644
Your Current Organism:
Lactuca sativa
NCBI taxonomy Id: 4236
Other names: L. sativa, Lactuca sativa L., cultivated lettuce, garden lettuce
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.