STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSAT_8X13361Uncharacterized protein. (108 aa)    
Predicted Functional Partners:
LSAT_9X82461
NAC domain-containing protein.
  
     0.492
LSAT_6X109441
WPP domain-containing protein.
  
     0.488
LSAT_7X54320
GH16 domain-containing protein.
  
   
 0.463
LSAT_9X58680
Aa_trans domain-containing protein.
      
 0.459
LSAT_3X87201
N-acetyltransferase domain-containing protein.
  
     0.457
LSAT_9X112340
NPH3 domain-containing protein; Belongs to the NPH3 family.
  
     0.456
LSAT_1X48880
BURP domain-containing protein.
  
     0.454
LSAT_2X83081
N-acetyltransferase domain-containing protein.
  
     0.448
LSAT_3X107201
Uncharacterized protein.
  
     0.447
LSAT_6X43121
Uncharacterized protein.
      
 0.445
Your Current Organism:
Lactuca sativa
NCBI taxonomy Id: 4236
Other names: L. sativa, Lactuca sativa L., cultivated lettuce, garden lettuce
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.