STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSAT_8X11680Uncharacterized protein. (431 aa)    
Predicted Functional Partners:
LSAT_1X114420
Beta-Casp domain-containing protein.
    
 0.539
LSAT_3X53521
Uncharacterized protein.
    
 0.510
LSAT_5X164660
Uncharacterized protein.
    
 0.510
LSAT_5X149661
Uncharacterized protein.
    
 0.509
LSAT_8X33541
Uncharacterized protein.
    
 0.507
LSAT_5X26101
AB hydrolase-1 domain-containing protein.
      
 0.483
LSAT_6X80100
Glycerol-3-phosphate acyltransferase, chloroplastic; Esterifies acyl-group from acyl-ACP to the sn-1 position of glycerol-3-phosphate. The enzyme from chilling-resistant plants discriminates against non-fluid palmitic acid and selects oleic acid whereas the enzyme from sensitive plants accepts both fatty acids. Belongs to the GPAT/DAPAT family.
   
  
 0.474
LSAT_8X45940
Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.
     
 0.426
LSAT_5X97060
NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.
      
 0.404
Your Current Organism:
Lactuca sativa
NCBI taxonomy Id: 4236
Other names: L. sativa, Lactuca sativa L., cultivated lettuce, garden lettuce
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.