STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSAT_6X80041NAD(P)-bd_dom domain-containing protein. (308 aa)    
Predicted Functional Partners:
LSAT_3X63961
Uncharacterized protein; Belongs to the complex I 75 kDa subunit family.
   
 0.925
LSAT_3X44180
Uncharacterized protein; Belongs to the complex I LYR family.
   
 0.918
LSAT_1X116501
Uncharacterized protein.
   
 0.915
LSAT_1X32740
L51_S25_CI-B8 domain-containing protein.
   
 0.913
LSAT_3X105561
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.
   
 0.906
LSAT_1X23980
Complex1_30kDa domain-containing protein; Belongs to the complex I 30 kDa subunit family.
   
 0.899
LSAT_5X36641
Uncharacterized protein.
   
 0.899
NdhJ
Uncharacterized protein; Belongs to the complex I 30 kDa subunit family.
   
 0.899
LSAT_8X144301
Uncharacterized protein.
   
 0.894
LSAT_4X184020
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.
   
 0.866
Your Current Organism:
Lactuca sativa
NCBI taxonomy Id: 4236
Other names: L. sativa, Lactuca sativa L., cultivated lettuce, garden lettuce
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.