STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSAT_1X12260SAC domain-containing protein. (900 aa)    
Predicted Functional Partners:
LSAT_4X75221
Uncharacterized protein.
    
 0.973
LSAT_1X39180
Uncharacterized protein.
    
 0.973
LSAT_4X14920
PIPK domain-containing protein.
    
 0.970
LSAT_3X69541
PIPK domain-containing protein.
    
 0.969
LSAT_1X13121
PIPK domain-containing protein.
    
 0.969
LSAT_4X135081
PIPK domain-containing protein.
    
 0.969
LSAT_4X161060
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
 
 0.933
LSAT_2X102840
Myotubularin phosphatase domain-containing protein.
     
 0.916
LSAT_8X23081
Myotubularin phosphatase domain-containing protein.
     
 0.916
LSAT_7X35481
SAC domain-containing protein.
  
  
 
0.905
Your Current Organism:
Lactuca sativa
NCBI taxonomy Id: 4236
Other names: L. sativa, Lactuca sativa L., cultivated lettuce, garden lettuce
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.