STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSAT_4X1238114_3_3 domain-containing protein; Belongs to the 14-3-3 family. (265 aa)    
Predicted Functional Partners:
LSAT_6X24461
Rhodanese domain-containing protein.
    
 0.752
LSAT_4X61921
Uncharacterized protein.
    
 0.594
LSAT_0X16720
Ubiquitin-like domain-containing protein.
    
 0.594
LSAT_3X139021
Uncharacterized protein.
  
 0.484
LSAT_5X143381
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.455
LSAT_3X74720
SER_THR_PHOSPHATASE domain-containing protein.
  
 0.451
LSAT_7X39660
Protein kinase domain-containing protein.
  
 0.441
LSAT_5X17401
SER_THR_PHOSPHATASE domain-containing protein.
  
 0.439
LSAT_0X11921
Prohibitin.
    
 0.430
LSAT_2X93661
Prohibitin.
    
 0.430
Your Current Organism:
Lactuca sativa
NCBI taxonomy Id: 4236
Other names: L. sativa, Lactuca sativa L., cultivated lettuce, garden lettuce
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.