STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSAT_1X71921AP2/ERF domain-containing protein. (286 aa)    
Predicted Functional Partners:
LSAT_0X20160
Uncharacterized protein.
  
     0.498
LSAT_8X39441
Uncharacterized protein.
  
     0.469
LSAT_8X39481
AP2/ERF domain-containing protein.
  
     0.451
LSAT_2X28400
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
  
     0.449
LSAT_9X37660
Uncharacterized protein.
  
     0.442
LSAT_2X91861
Uncharacterized protein.
  
     0.432
LSAT_8X61381
AIG1-type G domain-containing protein.
  
     0.430
LSAT_5X169481
Bac_surface_Ag domain-containing protein.
  
     0.424
LSAT_2X100281
Uncharacterized protein.
  
     0.417
LSAT_1X27080
Dof-type domain-containing protein.
  
     0.412
Your Current Organism:
Lactuca sativa
NCBI taxonomy Id: 4236
Other names: L. sativa, Lactuca sativa L., cultivated lettuce, garden lettuce
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.