STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSAT_4X26521FAD-binding PCMH-type domain-containing protein. (563 aa)    
Predicted Functional Partners:
LSAT_3X32600
Uncharacterized protein; Belongs to the cytochrome P450 family.
   
 
 0.964
LSAT_5X6480
EXPERA domain-containing protein.
   
 0.957
LSAT_5X137241
Uncharacterized protein.
   
 0.952
LSAT_4X31180
Methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Erg6/SMT family.
     
 0.950
LSAT_2X79380
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
   
 
 0.949
LSAT_3X80500
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
   
 
 0.949
LSAT_2X16021
Uncharacterized protein.
   
 0.948
LSAT_7X30060
Uncharacterized protein; Belongs to the cytochrome P450 family.
     
 0.942
LSAT_5X159820
PNPLA domain-containing protein.
    
  0.903
LSAT_8X83000
PNPLA domain-containing protein.
    
  0.903
Your Current Organism:
Lactuca sativa
NCBI taxonomy Id: 4236
Other names: L. sativa, Lactuca sativa L., cultivated lettuce, garden lettuce
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.