STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSAT_5X45581Uncharacterized protein. (2038 aa)    
Predicted Functional Partners:
LSAT_5X114881
Uncharacterized protein.
  
   
 0.603
LSAT_4X125040
Uncharacterized protein.
      
 0.559
LSAT_8X10781
Translocase of chloroplast; GTPase involved in protein precursor import into chloroplasts. Seems to recognize chloroplast-destined precursor proteins and regulate their presentation to the translocation channel through GTP hydrolysis.
      
 0.554
LSAT_9X14381
Uncharacterized protein.
      
 0.550
LSAT_9X960
AIG1-type G domain-containing protein.
      
 0.519
LSAT_6X47261
POTRA domain-containing protein.
      
 0.515
LSAT_4X182060
Uncharacterized protein.
  
    0.490
LSAT_6X67861
C2 domain-containing protein.
      
 0.483
LSAT_1X25461
Uncharacterized protein.
      
 0.483
LSAT_9X37301
GYF_2 domain-containing protein.
      
 0.483
Your Current Organism:
Lactuca sativa
NCBI taxonomy Id: 4236
Other names: L. sativa, Lactuca sativa L., cultivated lettuce, garden lettuce
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