STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSAT_2X128920Pectinesterase; In the C-terminal section; belongs to the pectinesterase family. (535 aa)    
Predicted Functional Partners:
LSAT_6X27021
3'-5' exonuclease domain-containing protein.
  
 0.855
LSAT_5X176881
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
  
 0.855
LSAT_5X149520
Uncharacterized protein.
   
 0.848
LSAT_8X66820
RECA_2 domain-containing protein.
    
 0.797
LSAT_1X28521
RECA_2 domain-containing protein.
   
 0.780
LSAT_6X38581
Uncharacterized protein.
  
  
 0.766
LSAT_6X39241
Uncharacterized protein.
  
  
 0.766
LSAT_6X39301
Uncharacterized protein.
  
  
 0.761
LSAT_1X74120
Uncharacterized protein.
  
  
 0.760
LSAT_6X50420
Uncharacterized protein.
  
  
 0.757
Your Current Organism:
Lactuca sativa
NCBI taxonomy Id: 4236
Other names: L. sativa, Lactuca sativa L., cultivated lettuce, garden lettuce
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.