STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSAT_5X130661Uncharacterized protein. (201 aa)    
Predicted Functional Partners:
LSAT_8X10080
F-box domain-containing protein.
  
     0.481
LSAT_2X113561
F-box domain-containing protein.
  
     0.466
LSAT_5X138721
F-box domain-containing protein.
  
     0.462
LSAT_5X137121
F-box domain-containing protein.
  
     0.460
LSAT_3X29581
Uncharacterized protein.
  
     0.456
LSAT_8X22121
F-box domain-containing protein.
  
     0.441
LSAT_1X83821
Uncharacterized protein.
  
     0.438
LSAT_4X2941
Uncharacterized protein.
  
     0.435
LSAT_4X59280
Uncharacterized protein.
  
     0.432
LSAT_4X53840
Uncharacterized protein.
  
     0.420
Your Current Organism:
Lactuca sativa
NCBI taxonomy Id: 4236
Other names: L. sativa, Lactuca sativa L., cultivated lettuce, garden lettuce
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.