Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LSAT_2X109841 | LSAT_2X51000 | A0A2J6L5A2 | A0A2J6M7X2 | Uncharacterized protein. | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | 0.995 |
LSAT_2X109841 | LSAT_4X179560 | A0A2J6L5A2 | A0A2J6K1K5 | Uncharacterized protein. | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | 0.995 |
LSAT_2X109841 | LSAT_4X35140 | A0A2J6L5A2 | A0A2J6KMD1 | Uncharacterized protein. | Brix domain-containing protein. | 0.984 |
LSAT_2X109841 | LSAT_5X13520 | A0A2J6L5A2 | A0A2J6KHY6 | Uncharacterized protein. | WD_REPEATS_REGION domain-containing protein. | 0.995 |
LSAT_2X109841 | LSAT_5X138060 | A0A2J6L5A2 | A0A2J6LIN7 | Uncharacterized protein. | Uncharacterized protein. | 0.545 |
LSAT_2X109841 | LSAT_5X138080 | A0A2J6L5A2 | A0A2J6LIV8 | Uncharacterized protein. | Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family. | 0.986 |
LSAT_2X109841 | LSAT_6X96180 | A0A2J6L5A2 | A0A2J6M9L8 | Uncharacterized protein. | Uncharacterized protein. | 0.995 |
LSAT_2X109841 | LSAT_7X66041 | A0A2J6L5A2 | A0A2J6M351 | Uncharacterized protein. | 60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. | 0.986 |
LSAT_2X109841 | LSAT_7X76380 | A0A2J6L5A2 | A0A2J6LAY1 | Uncharacterized protein. | Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. | 0.544 |
LSAT_2X109841 | LSAT_7X76501 | A0A2J6L5A2 | A0A2J6LBC0 | Uncharacterized protein. | Brix domain-containing protein. | 0.983 |
LSAT_2X51000 | LSAT_2X109841 | A0A2J6M7X2 | A0A2J6L5A2 | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | Uncharacterized protein. | 0.995 |
LSAT_2X51000 | LSAT_4X179560 | A0A2J6M7X2 | A0A2J6K1K5 | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | 0.544 |
LSAT_2X51000 | LSAT_4X35140 | A0A2J6M7X2 | A0A2J6KMD1 | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | Brix domain-containing protein. | 0.989 |
LSAT_2X51000 | LSAT_5X13520 | A0A2J6M7X2 | A0A2J6KHY6 | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | WD_REPEATS_REGION domain-containing protein. | 0.993 |
LSAT_2X51000 | LSAT_5X138060 | A0A2J6M7X2 | A0A2J6LIN7 | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | Uncharacterized protein. | 0.995 |
LSAT_2X51000 | LSAT_5X138080 | A0A2J6M7X2 | A0A2J6LIV8 | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family. | 0.992 |
LSAT_2X51000 | LSAT_6X96180 | A0A2J6M7X2 | A0A2J6M9L8 | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | Uncharacterized protein. | 0.997 |
LSAT_2X51000 | LSAT_7X66041 | A0A2J6M7X2 | A0A2J6M351 | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | 60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. | 0.983 |
LSAT_2X51000 | LSAT_7X76380 | A0A2J6M7X2 | A0A2J6LAY1 | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. | 0.995 |
LSAT_2X51000 | LSAT_7X76501 | A0A2J6M7X2 | A0A2J6LBC0 | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | Brix domain-containing protein. | 0.985 |
page 1 of 6