Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LSAT_1X20280 | LSAT_2X97601 | A0A2J6KRZ1 | A0A2J6M5H4 | Uncharacterized protein. | Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. | 0.999 |
LSAT_1X20280 | LSAT_3X11020 | A0A2J6KRZ1 | A0A2J6JNQ3 | Uncharacterized protein. | Origin of replication complex subunit 4; Component of the origin recognition complex (ORC) that binds origins of replication; Belongs to the ORC4 family. | 0.993 |
LSAT_1X20280 | LSAT_5X120180 | A0A2J6KRZ1 | A0A2J6LDE7 | Uncharacterized protein. | DNA helicase; Belongs to the MCM family. | 0.994 |
LSAT_1X20280 | LSAT_7X30521 | A0A2J6KRZ1 | A0A2J6MAQ0 | Uncharacterized protein. | MCM domain-containing protein; Belongs to the MCM family. | 0.998 |
LSAT_1X20280 | LSAT_7X4881 | A0A2J6KRZ1 | A0A2J6LZF5 | Uncharacterized protein. | AAA_16 domain-containing protein. | 0.999 |
LSAT_1X20280 | LSAT_8X54000 | A0A2J6KRZ1 | A0A2J6JJR1 | Uncharacterized protein. | Uncharacterized protein. | 0.982 |
LSAT_1X20280 | LSAT_8X89101 | A0A2J6KRZ1 | A0A2J6LNP6 | Uncharacterized protein. | Protein kinase domain-containing protein. | 0.785 |
LSAT_1X20280 | LSAT_9X10441 | A0A2J6KRZ1 | A0A2J6KG74 | Uncharacterized protein. | CDT1 domain-containing protein. | 0.988 |
LSAT_1X20280 | LSAT_9X46201 | A0A2J6KRZ1 | A0A2J6KUB6 | Uncharacterized protein. | ORC_WH_C domain-containing protein. | 0.997 |
LSAT_1X20280 | LSAT_9X8740 | A0A2J6KRZ1 | A0A2J6KG68 | Uncharacterized protein. | CDT1 domain-containing protein. | 0.988 |
LSAT_2X97601 | LSAT_1X20280 | A0A2J6M5H4 | A0A2J6KRZ1 | Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. | Uncharacterized protein. | 0.999 |
LSAT_2X97601 | LSAT_3X11020 | A0A2J6M5H4 | A0A2J6JNQ3 | Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. | Origin of replication complex subunit 4; Component of the origin recognition complex (ORC) that binds origins of replication; Belongs to the ORC4 family. | 0.992 |
LSAT_2X97601 | LSAT_5X120180 | A0A2J6M5H4 | A0A2J6LDE7 | Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. | DNA helicase; Belongs to the MCM family. | 0.999 |
LSAT_2X97601 | LSAT_7X30521 | A0A2J6M5H4 | A0A2J6MAQ0 | Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. | MCM domain-containing protein; Belongs to the MCM family. | 0.999 |
LSAT_2X97601 | LSAT_7X4881 | A0A2J6M5H4 | A0A2J6LZF5 | Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. | AAA_16 domain-containing protein. | 0.998 |
LSAT_2X97601 | LSAT_8X54000 | A0A2J6M5H4 | A0A2J6JJR1 | Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. | Uncharacterized protein. | 0.996 |
LSAT_2X97601 | LSAT_8X89101 | A0A2J6M5H4 | A0A2J6LNP6 | Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. | Protein kinase domain-containing protein. | 0.655 |
LSAT_2X97601 | LSAT_9X10441 | A0A2J6M5H4 | A0A2J6KG74 | Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. | CDT1 domain-containing protein. | 0.996 |
LSAT_2X97601 | LSAT_9X46201 | A0A2J6M5H4 | A0A2J6KUB6 | Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. | ORC_WH_C domain-containing protein. | 0.997 |
LSAT_2X97601 | LSAT_9X8740 | A0A2J6M5H4 | A0A2J6KG68 | Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. | CDT1 domain-containing protein. | 0.996 |
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