STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSAT_3X15540Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (278 aa)    
Predicted Functional Partners:
LSAT_6X13361
Uncharacterized protein.
  
 
  0.939
LSAT_1X83801
Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.
  
  
 
0.902
LSAT_6X94800
Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.
  
  
 
0.901
LSAT_2X83681
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.900
LSAT_8X24161
RRP7 domain-containing protein.
    
 0.900
LSAT_1X127100
Uncharacterized protein.
   
 0.900
LSAT_1X126920
Uncharacterized protein.
   
 0.900
LSAT_4X152020
Uncharacterized protein.
   
 0.893
LSAT_6X87641
Uncharacterized protein.
    
  0.842
LSAT_1X27101
WD_REPEATS_REGION domain-containing protein.
   
 
 0.830
Your Current Organism:
Lactuca sativa
NCBI taxonomy Id: 4236
Other names: L. sativa, Lactuca sativa L., cultivated lettuce, garden lettuce
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.