STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSAT_4X158941Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (693 aa)    
Predicted Functional Partners:
LSAT_5X19360
Uncharacterized protein.
   
 
 0.516
LSAT_0X42320
Uncharacterized protein.
  
     0.506
LSAT_8X34601
Uncharacterized protein.
   
 
 0.489
LSAT_5X107980
Uncharacterized protein.
  
     0.471
LSAT_3X48401
Uncharacterized protein.
  
     0.449
LSAT_3X10540
Uncharacterized protein.
  
     0.416
LSAT_1X55921
Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
0.415
LSAT_8X42980
Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.
  
     0.406
LSAT_1X11580
LOB domain-containing protein.
  
     0.403
LSAT_3X9881
Calponin-homology (CH) domain-containing protein.
   
 
 0.402
Your Current Organism:
Lactuca sativa
NCBI taxonomy Id: 4236
Other names: L. sativa, Lactuca sativa L., cultivated lettuce, garden lettuce
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.