STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSAT_6X14080TPR_REGION domain-containing protein. (264 aa)    
Predicted Functional Partners:
LSAT_6X49101
Uncharacterized protein.
  
 0.856
LSAT_1X59641
GalP_UDP_transf domain-containing protein.
  
 0.856
LSAT_2X11861
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
 0.782
LSAT_4X177060
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
 0.782
LSAT_3X10960
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
 0.607
LSAT_6X26901
Uncharacterized protein.
  
 0.607
LSAT_1X86980
NAD(P)-bd_dom domain-containing protein.
  
 0.607
LSAT_3X37661
GYF domain-containing protein.
  
 0.607
LSAT_7X51000
NAD(P)-bd_dom domain-containing protein.
  
 0.607
LSAT_5X87781
Epimerase domain-containing protein.
  
 0.607
Your Current Organism:
Lactuca sativa
NCBI taxonomy Id: 4236
Other names: L. sativa, Lactuca sativa L., cultivated lettuce, garden lettuce
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.