STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSAT_8X9660PFK domain-containing protein. (525 aa)    
Predicted Functional Partners:
LSAT_4X119160
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 0.973
LSAT_3X32661
Uncharacterized protein.
  
 
 0.961
LSAT_6X90321
Uncharacterized protein.
  
 
 0.955
LSAT_7X9600
TRANSKETOLASE_1 domain-containing protein.
  
 
 0.944
LSAT_3X132321
TRANSKETOLASE_1 domain-containing protein.
  
 
 0.944
LSAT_9X19140
CBM20 domain-containing protein.
     
 0.939
LSAT_5X172641
CBM20 domain-containing protein.
     
 0.939
LSAT_3X79700
Mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 1 family.
    
 0.914
LSAT_4X154001
Mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 1 family.
    
 0.914
LSAT_4X15680
Fructose-bisphosphate aldolase; Belongs to the class I fructose-bisphosphate aldolase family.
  
 0.814
Your Current Organism:
Lactuca sativa
NCBI taxonomy Id: 4236
Other names: L. sativa, Lactuca sativa L., cultivated lettuce, garden lettuce
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.