STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
LSAT_5X45441Beta-adaptin-like protein; Subunit of clathrin-associated adaptor protein complex that plays a role in protein sorting in the late-Golgi/trans-Golgi network (TGN) and/or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules. (830 aa)    
Predicted Functional Partners:
LSAT_8X30560
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
   
 0.972
LSAT_6X66241
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
   
 0.908
LSAT_3X16840
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
   
 0.908
LSAT_3X25480
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
 0.876
LSAT_5X61200
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
 0.876
LSAT_6X15600
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
 0.876
LSAT_3X20441
AP-4 complex subunit epsilon; AP-4 forms a non clathrin-associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system; Belongs to the adaptor complexes large subunit family.
   
 0.874
LSAT_6X14820
MHD domain-containing protein.
  
 
 0.873
LSAT_4X111701
Rhodanese domain-containing protein.
   
 0.862
LSAT_5X160121
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
   
 0.862
Your Current Organism:
Lactuca sativa
NCBI taxonomy Id: 4236
Other names: L. sativa, Lactuca sativa L., cultivated lettuce, garden lettuce
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