STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSAT_2X83261Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium. (1017 aa)    
Predicted Functional Partners:
LSAT_4X65480
Helicase ATP-binding domain-containing protein.
      
 0.704
LSAT_3X73000
Uncharacterized protein.
  
 
 0.574
LSAT_8X61661
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
   
 
 0.503
LSAT_7X48481
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
   
 
 0.503
LSAT_5X67961
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
   
 
 0.503
LSAT_9X14241
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
   
 
 0.499
LSAT_3X124841
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
   
 
 0.438
LSAT_9X76580
Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium.
  
 
0.435
LSAT_5X167061
Cation_ATPase_N domain-containing protein; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family.
  
 
0.431
LSAT_8X78840
Cation_ATPase_N domain-containing protein; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family.
  
 
0.428
Your Current Organism:
Lactuca sativa
NCBI taxonomy Id: 4236
Other names: L. sativa, Lactuca sativa L., cultivated lettuce, garden lettuce
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.