STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSAT_4X180741Uncharacterized protein. (105 aa)    
Predicted Functional Partners:
LSAT_3X2461
Uncharacterized protein.
  
     0.529
LSAT_7X25060
Uncharacterized protein.
  
     0.527
LSAT_4X6821
Uncharacterized protein.
  
     0.526
LSAT_3X124620
Uncharacterized protein; Belongs to the TCTP family.
  
     0.524
LSAT_7X7281
LOB domain-containing protein.
  
     0.524
LSAT_9X92320
Uncharacterized protein.
  
     0.522
LSAT_3X132720
LOB domain-containing protein.
  
     0.522
LSAT_2X35880
Uncharacterized protein.
  
     0.520
LSAT_4X65381
Uncharacterized protein.
  
     0.520
LSAT_4X38981
LOB domain-containing protein.
  
     0.519
Your Current Organism:
Lactuca sativa
NCBI taxonomy Id: 4236
Other names: L. sativa, Lactuca sativa L., cultivated lettuce, garden lettuce
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.