LSAT_7X33221 protein (Lactuca sativa) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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[Homology]

Score

LSAT_7X33221

Uncharacterized protein. (429 aa)

Predicted Functional Partners:

LSAT_9X8941

0.531

LSAT_5X181960

0.518

LSAT_3X22740

0.513

LSAT_8X61360

0.513

LSAT_2X100100

0.505

LSAT_8X69161

0.501

LSAT_2X134181

0.487

LSAT_8X96040

0.478

LSAT_3X76721

0.474

LSAT_5X147641

0.468

Your Current Organism:

Lactuca sativa

NCBI taxonomy Id: 4236
Other names: L. sativa, Lactuca sativa L., cultivated lettuce, garden lettuce

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LSAT_2X100100	LSAT_5X181960	A0A2J6M5K3	A0A2J6LZX4	Uncharacterized protein.	LOB domain-containing protein.	0.421
LSAT_2X100100	LSAT_7X33221	A0A2J6M5K3	A0A2J6MAM0	Uncharacterized protein.	Uncharacterized protein.	0.505
LSAT_2X100100	LSAT_8X69161	A0A2J6M5K3	A0A2J6M9J6	Uncharacterized protein.	BHLH domain-containing protein.	0.426
LSAT_2X100100	LSAT_9X8941	A0A2J6M5K3	A0A2J6KGA5	Uncharacterized protein.	LOB domain-containing protein.	0.432
LSAT_2X134181	LSAT_5X147641	A0A2J6K062	A0A2J6K0W1	Uncharacterized protein.	Uncharacterized protein.	0.511
LSAT_2X134181	LSAT_7X33221	A0A2J6K062	A0A2J6MAM0	Uncharacterized protein.	Uncharacterized protein.	0.487
LSAT_2X134181	LSAT_8X96040	A0A2J6K062	A0A2J6LTP0	Uncharacterized protein.	Uncharacterized protein.	0.520
LSAT_3X22740	LSAT_7X33221	A0A2J6L381	A0A2J6MAM0	USP domain-containing protein; Belongs to the peptidase C19 family.	Uncharacterized protein.	0.513
LSAT_3X76721	LSAT_5X181960	A0A2J6K6I6	A0A2J6LZX4	Uncharacterized protein.	LOB domain-containing protein.	0.466
LSAT_3X76721	LSAT_7X33221	A0A2J6K6I6	A0A2J6MAM0	Uncharacterized protein.	Uncharacterized protein.	0.474
LSAT_3X76721	LSAT_9X8941	A0A2J6K6I6	A0A2J6KGA5	Uncharacterized protein.	LOB domain-containing protein.	0.454
LSAT_5X147641	LSAT_2X134181	A0A2J6K0W1	A0A2J6K062	Uncharacterized protein.	Uncharacterized protein.	0.511
LSAT_5X147641	LSAT_7X33221	A0A2J6K0W1	A0A2J6MAM0	Uncharacterized protein.	Uncharacterized protein.	0.468
LSAT_5X147641	LSAT_8X69161	A0A2J6K0W1	A0A2J6M9J6	Uncharacterized protein.	BHLH domain-containing protein.	0.508
LSAT_5X181960	LSAT_2X100100	A0A2J6LZX4	A0A2J6M5K3	LOB domain-containing protein.	Uncharacterized protein.	0.421
LSAT_5X181960	LSAT_3X76721	A0A2J6LZX4	A0A2J6K6I6	LOB domain-containing protein.	Uncharacterized protein.	0.466
LSAT_5X181960	LSAT_7X33221	A0A2J6LZX4	A0A2J6MAM0	LOB domain-containing protein.	Uncharacterized protein.	0.518
LSAT_5X181960	LSAT_8X69161	A0A2J6LZX4	A0A2J6M9J6	LOB domain-containing protein.	BHLH domain-containing protein.	0.433
LSAT_7X33221	LSAT_2X100100	A0A2J6MAM0	A0A2J6M5K3	Uncharacterized protein.	Uncharacterized protein.	0.505
LSAT_7X33221	LSAT_2X134181	A0A2J6MAM0	A0A2J6K062	Uncharacterized protein.	Uncharacterized protein.	0.487