STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSAT_5X116421Uncharacterized protein. (283 aa)    
Predicted Functional Partners:
LSAT_2X136141
Uncharacterized protein.
   
 
 0.788
LSAT_3X139541
Uncharacterized protein.
   
 
 0.788
LSAT_5X2721
Serine/threonine-protein phosphatase.
   
 
 0.660
LSAT_4X64561
Serine/threonine-protein phosphatase 2A activator; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.
      
 0.538
LSAT_3X74720
SER_THR_PHOSPHATASE domain-containing protein.
    
 
 0.536
LSAT_0X10420
Serine/threonine-protein phosphatase.
    
 
 0.536
LSAT_6X24341
Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
      
 0.529
LSAT_3X127241
Leucine carboxyl methyltransferase 1 homolog; Involved in brassinosteroid (BR) signaling.
      
 0.469
LSAT_5X8340
Uncharacterized protein.
      
 0.422
LSAT_6X56180
Uncharacterized protein.
      
 0.422
Your Current Organism:
Lactuca sativa
NCBI taxonomy Id: 4236
Other names: L. sativa, Lactuca sativa L., cultivated lettuce, garden lettuce
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.