STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSAT_1X122260Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (327 aa)    
Predicted Functional Partners:
LSAT_4X30941
Uncharacterized protein; Belongs to the terpene synthase family.
      
 0.733
LSAT_4X123261
Uncharacterized protein; Belongs to the cytochrome P450 family.
      
 0.714
LSAT_4X123301
Uncharacterized protein; Belongs to the cytochrome P450 family.
      
 0.714
LSAT_6X114080
Uncharacterized protein; Belongs to the cytochrome P450 family.
      
 0.714
Ls3h2
Gibberellin 3beta-hydroxylase; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
0.705
Ls3h1
Gibberelin 3beta-hydroxylase; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
0.702
Ls20ox2
Gibberellin 20-oxidase; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
 
0.701
LSAT_4X37400
Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
 
0.699
LSAT_1X43140
Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
 
0.697
LSAT_7X6160
Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
  
 
0.697
Your Current Organism:
Lactuca sativa
NCBI taxonomy Id: 4236
Other names: L. sativa, Lactuca sativa L., cultivated lettuce, garden lettuce
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.