STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSAT_5X158540Nascent polypeptide-associated complex subunit beta. (145 aa)    
Predicted Functional Partners:
LSAT_8X83841
NAC-A/B domain-containing protein.
   
 0.899
LSAT_8X4841
NAC-A/B domain-containing protein.
   
 0.899
LSAT_2X134881
NAC-A/B domain-containing protein.
   
 0.899
LSAT_0X9821
NAC-A/B domain-containing protein.
   
 0.899
LSAT_5X146080
Uncharacterized protein.
   
 
 0.889
LSAT_7X38100
Putative ribosomal protein L31.
   
 
 0.889
LSAT_5X4380
Ribosomal_L2_C domain-containing protein.
   
   0.855
LSAT_4X112241
Uncharacterized protein.
   
 
 0.849
LSAT_7X114301
Uncharacterized protein.
   
 
 0.849
LSAT_3X22520
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family.
   
   0.841
Your Current Organism:
Lactuca sativa
NCBI taxonomy Id: 4236
Other names: L. sativa, Lactuca sativa L., cultivated lettuce, garden lettuce
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.