node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ssed_1861 | Ssed_1862 | Ssed_1861 | Ssed_1862 | KEGG: slo:Shew_1531 glutaredoxin, GrxA family. | KEGG: shn:Shewana3_2524 type III restriction enzyme, res subunit. | 0.702 |
Ssed_1862 | Ssed_1861 | Ssed_1862 | Ssed_1861 | KEGG: shn:Shewana3_2524 type III restriction enzyme, res subunit. | KEGG: slo:Shew_1531 glutaredoxin, GrxA family. | 0.702 |
Ssed_1862 | Ssed_2535 | Ssed_1862 | Ssed_2535 | KEGG: shn:Shewana3_2524 type III restriction enzyme, res subunit. | Helicase C2; KEGG: slo:Shew_2196 helicase C2. | 0.791 |
Ssed_1862 | dinG | Ssed_1862 | Ssed_1566 | KEGG: shn:Shewana3_2524 type III restriction enzyme, res subunit. | Helicase C2; DNA-dependent ATPase and 5'-3' DNA helicase. | 0.791 |
Ssed_1862 | polA | Ssed_1862 | Ssed_0096 | KEGG: shn:Shewana3_2524 type III restriction enzyme, res subunit. | DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.792 |
Ssed_1862 | rapA | Ssed_1862 | Ssed_0625 | KEGG: shn:Shewana3_2524 type III restriction enzyme, res subunit. | SNF2-related protein; Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair; Belongs to the SNF2/RAD54 helicase family. RapA subfamily. | 0.636 |
Ssed_1862 | rpoA | Ssed_1862 | Ssed_4294 | KEGG: shn:Shewana3_2524 type III restriction enzyme, res subunit. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.845 |
Ssed_1862 | rpoB | Ssed_1862 | Ssed_4324 | KEGG: shn:Shewana3_2524 type III restriction enzyme, res subunit. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.854 |
Ssed_1862 | rpoC | Ssed_1862 | Ssed_4323 | KEGG: shn:Shewana3_2524 type III restriction enzyme, res subunit. | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.580 |
Ssed_1862 | rpoZ | Ssed_1862 | Ssed_0335 | KEGG: shn:Shewana3_2524 type III restriction enzyme, res subunit. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.845 |
Ssed_1862 | xni | Ssed_1862 | Ssed_3311 | KEGG: shn:Shewana3_2524 type III restriction enzyme, res subunit. | 5'-3' exonuclease; Has flap endonuclease activity. During DNA replication, flap endonucleases cleave the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. | 0.749 |
Ssed_2535 | Ssed_1862 | Ssed_2535 | Ssed_1862 | Helicase C2; KEGG: slo:Shew_2196 helicase C2. | KEGG: shn:Shewana3_2524 type III restriction enzyme, res subunit. | 0.791 |
Ssed_2535 | polA | Ssed_2535 | Ssed_0096 | Helicase C2; KEGG: slo:Shew_2196 helicase C2. | DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.815 |
Ssed_2535 | rapA | Ssed_2535 | Ssed_0625 | Helicase C2; KEGG: slo:Shew_2196 helicase C2. | SNF2-related protein; Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair; Belongs to the SNF2/RAD54 helicase family. RapA subfamily. | 0.419 |
Ssed_2535 | rpoA | Ssed_2535 | Ssed_4294 | Helicase C2; KEGG: slo:Shew_2196 helicase C2. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.842 |
Ssed_2535 | rpoB | Ssed_2535 | Ssed_4324 | Helicase C2; KEGG: slo:Shew_2196 helicase C2. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.833 |
Ssed_2535 | rpoC | Ssed_2535 | Ssed_4323 | Helicase C2; KEGG: slo:Shew_2196 helicase C2. | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.469 |
Ssed_2535 | rpoZ | Ssed_2535 | Ssed_0335 | Helicase C2; KEGG: slo:Shew_2196 helicase C2. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.836 |
Ssed_2535 | xni | Ssed_2535 | Ssed_3311 | Helicase C2; KEGG: slo:Shew_2196 helicase C2. | 5'-3' exonuclease; Has flap endonuclease activity. During DNA replication, flap endonucleases cleave the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. | 0.700 |
dinG | Ssed_1862 | Ssed_1566 | Ssed_1862 | Helicase C2; DNA-dependent ATPase and 5'-3' DNA helicase. | KEGG: shn:Shewana3_2524 type III restriction enzyme, res subunit. | 0.791 |