STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ssed_2415Phosphoenolpyruvate-protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr). (566 aa)    
Predicted Functional Partners:
Ssed_2414
KEGG: shn:Shewana3_2256 phosphocarrier, HPr family.
 
 0.999
Ssed_2416
KEGG: slo:Shew_1864 PTS system, glucose subfamily, IIA subunit.
 
 0.999
Ssed_0722
KEGG: son:SO3965 phosphocarrier protein NPR.
 
 
 0.991
Ssed_3167
KEGG: slo:Shew_2641 PTS system, glucose-like IIB subunint.
  
 0.908
Ssed_0724
KEGG: slo:Shew_3313 PTS IIA-like nitrogen-regulatory protein PtsN.
 
  
 0.848
tuf
Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
    0.624
Ssed_1207
Alanine racemase; KEGG: saz:Sama_0937 transcriptional regulator, LacI family.
 
 
 
 0.621
pgk
KEGG: slo:Shew_0754 phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
   
  
 0.614
Ssed_1704
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
   
  
 0.561
Ssed_3540
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
   
  
 0.561
Your Current Organism:
Shewanella sediminis
NCBI taxonomy Id: 425104
Other names: S. sediminis HAW-EB3, Shewanella sediminis HAW-EB3, Shewanella sediminis str. HAW-EB3, Shewanella sediminis strain HAW-EB3
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