Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Ssed_2247 | Ssed_4274 | Ssed_2247 | Ssed_4274 | KEGG: msm:MSMEG_0277 putative aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.925 |
| Ssed_2247 | argA | Ssed_2247 | Ssed_0388 | KEGG: msm:MSMEG_0277 putative aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | KEGG: slo:Shew_3478 amino-acid N-acetyltransferase; Belongs to the acetyltransferase family. ArgA subfamily. | 0.913 |
| Ssed_2247 | argB | Ssed_2247 | Ssed_4275 | KEGG: msm:MSMEG_0277 putative aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.935 |
| Ssed_2247 | argC | Ssed_2247 | Ssed_4276 | KEGG: msm:MSMEG_0277 putative aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. | 0.929 |
| Ssed_2247 | argG | Ssed_2247 | Ssed_4273 | KEGG: msm:MSMEG_0277 putative aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | KEGG: slo:Shew_0205 argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.937 |
| Ssed_2247 | argH | Ssed_2247 | Ssed_4272 | KEGG: msm:MSMEG_0277 putative aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | KEGG: slo:Shew_0206 argininosuccinate lyase. | 0.943 |
| Ssed_2247 | argR | Ssed_2247 | Ssed_0951 | KEGG: msm:MSMEG_0277 putative aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Arginine repressor, ArgR; Regulates arginine biosynthesis genes. | 0.728 |
| Ssed_4274 | Ssed_2247 | Ssed_4274 | Ssed_2247 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | KEGG: msm:MSMEG_0277 putative aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.925 |
| Ssed_4274 | Ssed_4277 | Ssed_4274 | Ssed_4277 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | KEGG: slo:Shew_0201 acetylornithine deacetylase (ArgE). | 0.958 |
| Ssed_4274 | argA | Ssed_4274 | Ssed_0388 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | KEGG: slo:Shew_3478 amino-acid N-acetyltransferase; Belongs to the acetyltransferase family. ArgA subfamily. | 0.928 |
| Ssed_4274 | argB | Ssed_4274 | Ssed_4275 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.965 |
| Ssed_4274 | argC | Ssed_4274 | Ssed_4276 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. | 0.971 |
| Ssed_4274 | argD | Ssed_4274 | Ssed_0809 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | KEGG: slo:Shew_0578 acetylornithine and succinylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.943 |
| Ssed_4274 | argG | Ssed_4274 | Ssed_4273 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | KEGG: slo:Shew_0205 argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.998 |
| Ssed_4274 | argH | Ssed_4274 | Ssed_4272 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | KEGG: slo:Shew_0206 argininosuccinate lyase. | 0.968 |
| Ssed_4274 | argR | Ssed_4274 | Ssed_0951 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Arginine repressor, ArgR; Regulates arginine biosynthesis genes. | 0.908 |
| Ssed_4277 | Ssed_4274 | Ssed_4277 | Ssed_4274 | KEGG: slo:Shew_0201 acetylornithine deacetylase (ArgE). | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.958 |
| Ssed_4277 | argA | Ssed_4277 | Ssed_0388 | KEGG: slo:Shew_0201 acetylornithine deacetylase (ArgE). | KEGG: slo:Shew_3478 amino-acid N-acetyltransferase; Belongs to the acetyltransferase family. ArgA subfamily. | 0.707 |
| Ssed_4277 | argB | Ssed_4277 | Ssed_4275 | KEGG: slo:Shew_0201 acetylornithine deacetylase (ArgE). | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.909 |
| Ssed_4277 | argC | Ssed_4277 | Ssed_4276 | KEGG: slo:Shew_0201 acetylornithine deacetylase (ArgE). | N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily. | 0.949 |
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