STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ssed_4463KEGG: shn:Shewana3_3611 methyl-accepting chemotaxis sensory transducer. (552 aa)    
Predicted Functional Partners:
Ssed_3046
KEGG: slo:Shew_1386 CheA signal transduction histidine kinase.
 
 0.977
Ssed_0186
KEGG: slo:Shew_0113 CheA signal transduction histidine kinase.
 
 0.976
Ssed_2678
KEGG: slo:Shew_2144 response regulator receiver modulated CheW protein.
 
 0.960
Ssed_2899
KEGG: slo:Shew_1457 response regulator receiver modulated CheW protein.
 
 0.957
Ssed_3041
KEGG: slo:Shew_1391 CheW protein.
 
 0.957
Ssed_0185
KEGG: slo:Shew_0112 CheW protein.
 
 0.954
Ssed_3089
KEGG: slo:Shew_1343 response regulator receiver modulated CheW protein.
 
 0.954
Ssed_3088
Protein-glutamate O-methyltransferase; KEGG: slo:Shew_1344 MCP methyltransferase, CheR-type.
 
 0.938
Ssed_0183
Protein-glutamate O-methyltransferase; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.
 
 0.935
cheB-2
Protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
 0.935
Your Current Organism:
Shewanella sediminis
NCBI taxonomy Id: 425104
Other names: S. sediminis HAW-EB3, Shewanella sediminis HAW-EB3, Shewanella sediminis str. HAW-EB3, Shewanella sediminis strain HAW-EB3
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.