STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108443239TBC1 domain family, member 7. (294 aa)    
Predicted Functional Partners:
tsc2
TSC complex subunit 2.
    
 0.999
LOC108438099
TSC complex subunit 1b.
    
 0.993
tsc1
TSC complex subunit 1a.
    
 0.991
LOC108435697
Ras homolog, mTORC1 binding like 1.
     
 0.944
trap1
TNF receptor-associated protein 1.
    
 0.925
hsp90ab1
Heat shock protein 90, alpha (cytosolic), class B member 1.
    
 0.925
LOC108411468
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1.
    
 0.925
LOC108411456
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2.
    
 0.925
rheb
Ras homolog, mTORC1 binding.
     
 0.920
akt2
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.911
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.