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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108425788Engulfment and cell motility 1 (ced-12 homolog, C. elegans). (741 aa)    
Predicted Functional Partners:
dock4
Dedicator of cytokinesis 4; Belongs to the DOCK family.
  
 
 0.977
LOC108425388
Dedicator of cytokinesis 4b; Belongs to the DOCK family.
  
 
 0.976
ENSPNAP00000028748
Ras homolog family member Ga.
    
 0.970
ENSPNAP00000029630
Uncharacterized protein.
    
 0.941
ENSPNAP00000003227
Ras homolog gene family, member Gc.
    
 0.912
ENSPNAP00000006272
Ras homolog gene family, member Gd.
    
 0.912
dock1
Dedicator of cytokinesis 1; Belongs to the DOCK family.
    
 0.889
elmo2
Engulfment and cell motility 2.
  
  
 
0.882
DOCK2
Dedicator of cytokinesis 2; Belongs to the DOCK family.
    
 0.880
LOC108434414
Uncharacterized protein; Belongs to the DOCK family.
  
 
 0.869
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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