Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
synpo2lSynaptopodin 2-like a. (1208 aa)    
Predicted Functional Partners:
myoz2
Myozenin 2b.
   
 
 0.795
LOC108437079
Myozenin 2a.
   
 
 0.795
ociad2
OCIA domain containing 2.
      
 0.711
lias
Lipoyl synthase, mitochondrial; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.
   
  
 0.672
wdtc1
WD and tetratricopeptide repeats 1.
    
 
 0.640
LOC108424262
Synemin, intermediate filament protein; Belongs to the intermediate filament family.
   
 
 0.619
myoz3
Uncharacterized protein.
     
  0.582
ENSPNAP00000009737
Uncharacterized protein.
     
  0.582
LOC108430946
Myozenin 3a.
     
  0.582
mad2l1
MAD2 mitotic arrest deficient-like 1 (yeast).
      
 0.539
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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