Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
hoxa5Homeobox A5a. (271 aa)    
Predicted Functional Partners:
nfatc2
Nuclear factor of activated T cells 2a.
      
 0.750
hoxb2
Homeobox B2a.
   
 
 0.701
LOC108433363
Homeobox C10a.
    
 
 0.696
hoxa2
Homeobox domain-containing protein.
   
 
 0.695
hoxa3
Homeobox A4a.
   
  
 0.692
LOC108433402
Homeobox C3a.
   
  
 0.690
hoxd10
Homeobox D10a.
    
 
 0.690
LPCAT1
Lysophosphatidylcholine acyltransferase 1.
      
 0.575
lpcat2
Lysophosphatidylcholine acyltransferase 2.
      
 0.575
lpcat1
Lysophosphatidylcholine acyltransferase 1.
      
 0.575
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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