Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
LOC108425271Tax1 (human T-cell leukemia virus type I) binding protein 1a. (772 aa)    
Predicted Functional Partners:
LOC108413416
NBR1 autophagy cargo receptor a.
   
 0.987
LOC108437991
NBR1 autophagy cargo receptor b.
   
 0.985
sqstm1
Sequestosome 1.
    
 0.985
tnfaip3
Tumor necrosis factor, alpha-induced protein 3.
    
 0.974
map1lc3c
Microtubule-associated protein 1 light chain 3 gamma.
    
 0.973
LOC108437082
GABA(A) receptor-associated protein b.
    
 0.966
GABARAPL2
GABA(A) receptor-associated protein like 2.
    
 0.961
optn
Optineurin.
   
 0.961
map1lc3a
Microtubule-associated protein 1 light chain 3 alpha.
   
 0.954
rps27a
Ribosomal protein S27a.
    
  0.953
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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