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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108424107FERM domain containing 4Ba. (1032 aa)    
Predicted Functional Partners:
sav1
Salvador family WW domain containing protein 1.
    
 0.602
plekha5
Pleckstrin homology domain containing, family A member 5.
    
 0.513
lats1
Large tumor suppressor kinase 1.
    
 
 0.497
lats2
Large tumor suppressor kinase 2.
    
 
 0.497
trip12
Thyroid hormone receptor interactor 12.
    
 0.495
frmd6
FERM domain containing 6.
    
0.476
LOC108426497
Si:ch73-205h11.1.
    
 0.476
LOC108415085
FERM domain containing 1.
    
 0.476
sdc1
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
    
 0.475
LOC108427579
Membrane associated guanylate kinase, WW and PDZ domain containing 3b.
    
 0.465
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.