Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC108412555Zinc finger protein 574. (1031 aa)    
Predicted Functional Partners:
haus3
HAUS augmin-like complex, subunit 3.
    
 
 0.716
plekhj1
Pleckstrin homology domain containing, family J member 1.
    
 0.635
LOC108428616
Myc target 1b.
      
 0.626
LOC108428438
Golgi glycoprotein 1a.
      
 0.598
ENSPNAP00000024708
Si:dkey-220o5.5.
      
 0.595
gpatch1
G patch domain containing 1.
      
 0.557
mysm1
Myb-like, SWIRM and MPN domains 1.
    
  0.550
LOC108432331
Platelet-activating factor acetylhydrolase, isoform Ib, gamma subunit.
      
 0.548
LOC108412904
Uncharacterized protein.
    
  0.541
dbi
Diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein).
      
 0.504
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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