Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
wipf3Sb:cb649. (452 aa)    
Predicted Functional Partners:
LOC108442246
WASP actin nucleation promoting factor a.
   
 0.957
LOC108415565
Uncharacterized protein.
   
 0.957
wasl
Uncharacterized protein.
   
 0.957
was
Uncharacterized protein.
   
 0.957
LOC108438666
WAS/WASL interacting protein family, member 2a.
     
  0.860
LOC108438396
WAS/WASL interacting protein family, member 2b.
     
  0.860
LOC108424359
WAS/WASL interacting protein family, member 1a.
     
  0.858
LOC108430877
WAS/WASL interacting protein family, member 1b.
     
  0.858
LOC108411462
Si:ch211-1o7.3.
   
 0.795
LOC108440730
Si:dkey-197j19.6.
   
 0.795
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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