Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC108432048Zgc:171844. (193 aa)    
Predicted Functional Partners:
dctn4
Dynactin 4.
    
   0.772
DCTN6
Dynactin subunit 6.
    
   0.712
LOC108440427
Dynactin 1a.
    
   0.539
dctn1
Dynactin 1b.
    
   0.539
fam193a
Family with sequence similarity 193 member A.
    
   0.539
fam193b
Family with sequence similarity 193 member B.
    
   0.539
fopnl
Fgfr1op N-terminal like.
      
 0.463
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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