Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC108442645Amino acid transporter. (549 aa)    
Predicted Functional Partners:
plp1
Proteolipid protein 1a.
   
 
 0.769
LOC108415453
Uncharacterized protein.
   
 
 0.769
tnr
Tenascin R (restrictin, janusin).
   
    0.752
LOC108434249
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
    
 0.738
slc6a4
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
    
 0.738
slc7a5
Solute carrier family 7 member 5.
   
 
 0.725
blmh
Bleomycin hydrolase; Belongs to the peptidase C1 family.
      
 0.714
LOC108416161
Amino acid transporter.
   
 
  0.702
slc1a3
Amino acid transporter.
   
 
  0.702
LOC108437295
Amino acid transporter.
   
 
  0.702
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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