Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
fam20bFAM20B glycosaminoglycan xylosylkinase. (409 aa)    
Predicted Functional Partners:
LOC108439755
Xylosyltransferase I.
      
 0.946
uxs1
UDP-glucuronate decarboxylase 1.
      
 0.846
LOC108412745
FAM20C golgi associated secretory pathway kinase a.
    
  0.811
LOC108436593
Family with sequence similarity 20 member C, like.
    
  0.811
LOC108432010
FAM20C golgi associated secretory pathway kinase b.
    
  0.811
LOC108411357
Chloride channel accessory 1.
   
 
  0.805
pxylp1
2-phosphoxylose phosphatase 1; Belongs to the histidine acid phosphatase family.
      
 0.780
dcn
Decorin; May affect the rate of fibrils formation.
    
 0.773
gask1a
Golgi associated kinase 1A.
      
 0.765
LOC108412257
Xylosyltransferase II.
      
 0.757
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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