Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cuedc1CUE domain containing 1b. (402 aa)    
Predicted Functional Partners:
LOC108424737
Uncharacterized protein; Belongs to the TOM1 family.
    
   0.709
LOC108432086
Target of myb1 membrane trafficking protein; Belongs to the TOM1 family.
    
   0.709
LOC108432008
Target of myb1 like 2 membrane trafficking protein; Belongs to the TOM1 family.
    
   0.709
TOM1L2
Target of myb1 like 2 membrane trafficking protein; Belongs to the TOM1 family.
    
   0.709
rnf14
RBR-type E3 ubiquitin transferase.
      
 0.697
fam189b
Si:dkey-7f3.9.
    
   0.636
LOC108431834
E3 ubiquitin-protein ligase.
    
   0.632
LOC108442805
E3 ubiquitin-protein ligase.
    
   0.632
LOC108425239
Arrestin domain containing 3b.
    
   0.630
arrdc4
Arrestin domain containing 4.
    
   0.630
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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