close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cnga4Cyclic nucleotide gated channel subunit alpha 4. (554 aa)    
Predicted Functional Partners:
LOC108443610
Si:dkey-44k1.5.
  
0.836
LOC108433447
Cyclic nucleotide gated channel beta 1a.
  
0.835
LOC108428909
Cyclic nucleotide gated channel beta 3, tandem duplicate 2.
  
0.834
LOC108428960
Cyclic nucleotide gated channel beta 3, tandem duplicate 1.
  
0.834
LOC108443773
Cyclic nucleotide gated channel alpha 2b.
  
  
0.608
cnga2
Cyclic nucleotide gated channel alpha 2a.
  
  
0.607
exoc4
Exocyst complex component 4.
     
 0.604
guca1b
Guanylate cyclase activator 1B.
   
 
 0.594
CALML6
Calmodulin like 6.
     
 0.571
guca1a
Guanylate cyclase activator 1A.
   
 
 0.565
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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