Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC108412554Tubulin domain-containing protein; Belongs to the tubulin family. (453 aa)    
Predicted Functional Partners:
LOC108423915
NME/NM23 family member 8; Belongs to the NDK family.
   
 
 0.823
cct2
Chaperonin containing TCP1, subunit 2 (beta).
   
 0.770
mad2l1
MAD2 mitotic arrest deficient-like 1 (yeast).
   
 0.759
cct8
Chaperonin containing TCP1, subunit 8 (theta).
   
 0.754
wdr90
WD repeat domain 90.
    
 0.752
tbca
Tubulin-specific chaperone A; Belongs to the TBCA family.
   
 0.720
lrguk
Leucine-rich repeats and guanylate kinase domain containing.
    
 
 0.712
katnal2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
    
 0.711
cct7
T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.
   
 0.710
eef1g
Eukaryotic translation elongation factor 1 gamma.
   
 
 0.697
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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