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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
clul1Clusterin; Belongs to the clusterin family. (501 aa)    
Predicted Functional Partners:
LOC108437312
Retinol binding protein 3.
   
  
 0.880
guca1a
Guanylate cyclase activator 1A.
   
    0.705
xrcc6
X-ray repair complementing defective repair in Chinese hamster cells 6.
    
 
 0.661
c8b
Complement component 8, beta polypeptide.
   
 0.627
APP
Amyloid beta precursor protein.
    
 0.444
LOC108426075
Amyloid beta (A4) precursor protein b.
    
 0.444
gucd1
Guanylyl cyclase domain containing 1.
      
 0.433
dctn4
Dynactin 4.
      
 0.433
aplp2
Amyloid beta (A4) precursor-like protein 2.
    
 0.420
podxl2
Uncharacterized protein.
    
 0.419
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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