Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
prxl2cPeroxiredoxin like 2C. (226 aa)    
Predicted Functional Partners:
znf367
Zinc finger protein 367.
      
 0.691
LOC108414201
Uncharacterized protein.
      
 0.688
ENSPNAP00000007718
Uncharacterized protein.
      
 0.688
mrps27
Mitochondrial ribosomal protein S27.
      
 0.688
ubox5
U-box domain containing 5.
      
 0.659
FBXL17
F-box and leucine rich repeat protein 17.
      
 0.608
snrpa1
Selenoprotein S.
      
 0.608
ENSPNAP00000023605
F-box and leucine-rich repeat protein 17.
      
 0.608
trip12
Thyroid hormone receptor interactor 12.
      
 0.592
dcxr
Dicarbonyl/L-xylulose reductase.
     
 0.591
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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