Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
chchd1Coiled-coil-helix-coiled-coil-helix domain containing 1. (121 aa)    
Predicted Functional Partners:
mrps14
Mitochondrial ribosomal protein S14.
   
  0.999
mrps16
Mitochondrial ribosomal protein S16.
   
 0.998
mrps11
Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family.
   
 0.998
mrps33
Mitochondrial ribosomal protein S33.
   
 0.997
mrps17
Mitochondrial ribosomal protein S17.
   
 0.997
mrps23
Mitochondrial ribosomal protein S23.
   
  0.997
mrps21
Mitochondrial ribosomal protein S21.
   
  0.997
mrps7
Mitochondrial ribosomal protein S7.
   
 0.997
ENSPNAP00000031325
Mitochondrial ribosomal protein S28.
   
  0.997
aurkaip1
Aurora kinase A interacting protein 1.
   
 0.997
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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