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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chchd1Coiled-coil-helix-coiled-coil-helix domain containing 1. (121 aa)    
Predicted Functional Partners:
mrps33
Mitochondrial ribosomal protein S33.
   
 0.999
mrps14
Mitochondrial ribosomal protein S14.
   
  0.999
mrps23
Mitochondrial ribosomal protein S23.
   
  0.999
mrps16
Mitochondrial ribosomal protein S16.
   
  0.999
ENSPNAP00000031325
Mitochondrial ribosomal protein S28.
   
  0.999
mrps24
Mitochondrial ribosomal protein S24.
   
 0.999
mrps25
Mitochondrial ribosomal protein S25.
   
  0.998
ENSPNAP00000004077
Mitochondrial ribosomal protein S31.
   
 0.998
mrps5
Mitochondrial ribosomal protein S5; Belongs to the universal ribosomal protein uS5 family.
    
 0.998
mrps17
Mitochondrial ribosomal protein S17.
   
 0.998
Your Current Organism:
Pygocentrus nattereri
NCBI taxonomy Id: 42514
Other names: P. nattereri, Serrasalmus nattereri, red piranha, red-bellied piranha
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